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rs29221863 SNP Detail
Summary
  • ID
    rs29221863
  • Variation Type
    SNP
  • Alleles
    A/G
Genome Location and Flanking Sequence
  • Location
    Chr12:57870585 (GRCm39)
  • SNP Orientation to the Genome
    forward
  • SNP Reference Flanking Sequence
                                          TTCCT GAGAGAGTCA TTTTTCTTGA
    R
    ACTGGGTGGC AGGAGGGGGA ACAAG                                      
    
    R = A/G
    

    Note: Sequence in lower case indicates low-complexity or repetitive sequence
    BLAST SNP flanking sequence against the mouse Genome
SNP Assays
and
SNP Consensus
Strain alleles of submitted assays, and consensus values for this SNP
Legend
Assay ID Submitter
SNP ID
Submitter
Handle
Population
ss orientation
Variation Type
129X1/SvJ
A/J
C57BL/6J
DBA/2J
LG/J
SM/J
ss39040549 mCV22774978 ABI CRAMUS_MOUSE f SNP A G A G
ss137785074 ENSMUSSNP6640926 ENSEMBL ENSEMBL_Sanger f SNP A G G
ss324051857 CHEV_12_58924786 CHEVERUD SCREENING_POP f SNP A G
SNP Consensus Information
SNP Consensus Type
129X1/SvJ
A/J
C57BL/6J
DBA/2J
LG/J
SM/J
rs29221863 SNP A G A G A G
Gene/Marker
Associations
and
Function
Classes
MGI genes/markers associated with the SNP
Location: Chr12:57870585 () rs orientation: forward
Symbol Name Transcript Protein Function
Class
Allele Residue Codon
Position
AA
Position
Rr256918 regulatory region 256918 16 bp proximal
Rr256919 regulatory region 256919 1816 bp proximal
Rr269559 regulatory region 269559 1835 bp proximal

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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Funding Information
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last database update
12/17/2024
MGI 6.24
The Jackson Laboratory