rs29226909 SNP Detail

Summary

• ID
  rs29226909
• Variation Type
  SNP
• Alleles
  A/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr13:35354793 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        GATCAAGCCA GTAACTACCA TTCCTCCATG TTCTCTGCTC
  CAGTTCCTGC CTTGACTTCC TCTGATAATG GACAATAACC TGCAAACTAA ATATACCTTT
  W
  TTTCTACAAG CTGCCCTTGG TCACAATGTT TTATCACAGT AACAGAAATC AAACTAAGAC
  ATTGACCCTA AGCAATCACA GTGATGCTGG TCCATTGGA                       
  
  W = A/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
ss39045125	mCV25144919	ABI	CRAMUS_MOUSE	f	SNP	T	A	T	A
ss148862445	ENSMUSSNP1997054	ENSEMBL	ENSEMBL_Sanger	f	SNP	T	A		A
ss324314278	CHEV_13_35262679	CHEVERUD	SCREENING_POP	f	SNP					A	A
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
rs29226909					SNP	T	A	T	A	A	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr13:35354793 () rs orientation: forward

Symbol	Name	Function Class
Rr275746	regulatory region 275746	808 bp proximal
Rr275747	regulatory region 275747	1808 bp proximal