rs29232040 SNP Detail

Summary

• ID
  rs29232040
• Variation Type
  SNP
• Alleles
  C/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  125
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr13:100006343 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                                                   
  TAATCAAGAA TTTGAGAAGC TAAGCCATTT AAGTATCAGT ACCATCTGCA GTAAGCAATG
  GGTTAAGCCC TTTACAAGTT GCAAATATTA GAACTCTTGG GTTCCAGCCA CAGAGAAGCT
  GCGTAGAAAA GATTTAAAAT AAATAATAAG CTTTCAACTA GAAACAAAAG GCCAAATTAC
  TGTAAGAAAT CATTTGGAAA TGACTTGAGC GGATTTGTAA AACTCAAGTG AGCATTATTG
  AAGTGGAAGG TGAGAGTAGA TAACATATTC AGTCTGCCTC ACAGAGATGA AAGGGCGGGG
  S
  GGGGCGGGGT TCAAGAGGTC CAGGAACCCT GGGAGAGTAA GACACCCTGA ATATGATAAA
  ACATGAAGAC ACACAAAGGC CATCCAACTA CTCCAATGTC CTAGAAGCAA AGACCACTGT
  ACAGGGCCAC ACAGGCAAGC CTCTAGGCTC ATCAGAAGGC AGAGGGAGCA AACAAGCATG
  GGTGGTTATT GTAGCTTCCC TGGGAGGAAT GGATAAATAA GTTAGGAAGT ATTAGGACAG
  ACTAGTAGAA TGATCTCTAA CTGCTTAGTA CGTGGTCCTG GTCTGTGTGG TTAGAACTCT
                                                                   
  
  S = C/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J
ss39049876	mCV24332459	ABI	CRAMUS_MOUSE	f	SNP	C	G
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J
rs29232040					SNP	C	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr13:100006343 () rs orientation: forward

Symbol	Name	Function Class
Rr269933	regulatory region 269933	943 bp distal