rs29234935 SNP Detail

Summary

• ID
  rs29234935
• Variation Type
  SNP
• Alleles
  C/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr13:45543018 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        GTCGC CCAGTGGCAG AGGCCGCGAC
  S
  GTGCTGGGGA TTGGGGAGAG GATGG                                      
  
  S = C/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
ss39052894	mCV22908434	ABI	CRAMUS_MOUSE	f	SNP	G	G	C	G
ss148962670	ENSMUSSNP4004270	ENSEMBL	ENSEMBL_Sanger	f	SNP	G	G		G
ss324332393	CHEV_13_45484911	CHEVERUD	SCREENING_POP	f	SNP					G	C
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
rs29234935					SNP	G	G	C	G	G	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr13:45543018 () rs orientation: forward

Symbol	Name	Function Class
Cpgi5531	CpG island 5531	within coordinates
Mylip	myosin regulatory light chain interacting protein	200 bp upstream
Rr403746	regulatory region 403746	within coordinates
Rr478671	regulatory region 478671	1928 bp distal
Rr478672	regulatory region 478672	850 bp distal
Rr478673	regulatory region 478673	within coordinates
Rr478674	regulatory region 478674	9 bp distal
Rr478675	regulatory region 478675	895 bp proximal
Rr478676	regulatory region 478676	1779 bp proximal
Tssr119571	transcription start site region 119571	192 bp upstream