rs29235872 SNP Detail

Summary

• ID
  rs29235872
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr13:36069850 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        AGGAGGAGGA AGAAGAAGAA GAAGAAGAAG AAGAAGAAGA
  AGAAGAAGAA GAAGAAGAAG AAGAAGAAGA AGAAGAAGAA GAAGAAGAAG AAGAAGAAGA
  R
  GGGAAAGGAA AAAAAGAAAA GGAAAAAGAA AGAAACAAGG CAATTTTGCT TGCTTCTTTT
  TCAGCTCCTG GACTAAATGG AGGAAAAAAA ATAACGTGG                       
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	DBA/2J	LG/J	SM/J
ss39054829	mCV24198987	ABI	CRAMUS_MOUSE	f	SNP	A	G
ss324315041	CHEV_13_35977736	CHEVERUD	SCREENING_POP	f	SNP			G	A
SNP Consensus Information
SNP					Consensus Type	A/J	DBA/2J	LG/J	SM/J
rs29235872					SNP	A	G	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr13:36069850 () rs orientation: forward

Symbol	Name	Function Class
Rr271494	regulatory region 271494	650 bp distal
Rr271495	regulatory region 271495	351 bp proximal
Rr283230	regulatory region 283230	288 bp distal