rs29235914 SNP Detail

Summary

• ID
  rs29235914
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr13:63283884 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        TATAG GATGGTGACA GGGTAAAGTA
  Y
  AGCGACTGGT TATCCTCTTC TAACA                                      
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	C57BL/6J	DBA/2J	FVB/NJ	KK/HlJ	LG/J	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	SM/J	WSB/EiJ
ss39050919	mCV25259521	ABI	CRAMUS_MOUSE	f	SNP		C	C					T	C
ss61818468	NES17756623	PERLEGEN	MM_PANEL2	f	SNP	C		C	T	C	C	T		C	C	C		C	C	C	C		C
ss149138195	ENSMUSSNP1313252	ENSEMBL	ENSEMBL_Sanger	f	SNP		C	C						C
ss324374655	CHEV_13_63237430	CHEVERUD	SCREENING_POP	f	SNP												C					C
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	C57BL/6J	DBA/2J	FVB/NJ	KK/HlJ	LG/J	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	SM/J	WSB/EiJ
rs29235914					SNP	C	C	C	T	C	C	T	T	C	C	C	C	C	C	C	C	C	C

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss61818468	NES17756623	PERLEGEN	MM_PANEL	f	SNP	C/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr13:63283884 () rs orientation: forward

Symbol	Name	Function Class
Aopep	aminopeptidase O	within coordinates
Gm30409	predicted gene, 30409	1557 bp downstream
Rr273239	regulatory region 273239	717 bp proximal
Rr276922	regulatory region 276922	883 bp distal
Rr276923	regulatory region 276923	484 bp distal
Rr284651	regulatory region 284651	801 bp proximal