rs29235997 SNP Detail

Summary

• ID
  rs29235997
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr13:34271698 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        TGATT GCAGTTACCA AGCTACAGCC
  R
  AGGGGAGTAA AAACCCTGCT GTGCT                                      
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	C57BL/6J	DBA/2J	FVB/NJ	KK/HlJ	LG/J	NOD/ShiLtJ	NZW/LacJ	SM/J	WSB/EiJ
ss39052317	mCV22533502	ABI	CRAMUS_MOUSE	f	SNP	A	A	G					A	G
ss51083407	NES14363172	PERLEGEN	MM_PANEL2	f	SNP	A		G	G	G	G	G		G	A	G		A	A		A
ss148857475	ENSMUSSNP4007023	ENSEMBL	ENSEMBL_Sanger	f	SNP		A	G						G
ss324313052	CHEV_13_34179584	CHEVERUD	SCREENING_POP	f	SNP												G			G
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	C57BL/6J	DBA/2J	FVB/NJ	KK/HlJ	LG/J	NOD/ShiLtJ	NZW/LacJ	SM/J	WSB/EiJ
rs29235997					SNP	A	A	G	G	G	G	G	A	G	A	G	G	A	A	G	A

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss51083407	NES14363172	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr13:34271698 () rs orientation: forward

Symbol	Name	Function Class
4930447K03Rik	RIKEN cDNA 4930447K03 gene	within coordinates
Gm47065	predicted gene, 47065	within coordinates
Rr281206	regulatory region 281206	502 bp proximal