rs29236444 SNP Detail

Summary

• ID
  rs29236444
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr13:77280554 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        CAAAA TATATACAAG TCTCCAGGAC
  R
  GTTAATTTCA CAGCTTTGAA TTCAC                                      
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
ss39053873	mCV22684979	ABI	CRAMUS_MOUSE	f	SNP	A	A	G	A
ss144701597	ENSMUSSNP3530633	ENSEMBL	ENSEMBL_Sanger	f	SNP	A	A		A
ss324447428	CHEV_13_77271696	CHEVERUD	SCREENING_POP	f	SNP					A	A
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
rs29236444					SNP	A	A	G	A	A	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr13:77280554 () rs orientation: forward

Symbol	Name	Function Class
Rr281682	regulatory region 281682	1846 bp proximal
Rr284991	regulatory region 284991	within coordinates
Slf1	SMC5-SMC6 complex localization factor 1	within coordinates
Tssr123275	transcription start site region 123275	1106 bp upstream