rs29237910 SNP Detail

Summary

• ID
  rs29237910
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr13:77277475 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        CCTAT TGAAAACATA ATTAAAACTG
  Y
  TATGGAATAA CTGATTGGCA GAAGG                                      
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	LG/J	SM/J
ss39055170	mCV22684959	ABI	CRAMUS_MOUSE	f	SNP	C		T
ss144701539	ENSMUSSNP6023002	ENSEMBL	ENSEMBL_Sanger	f	SNP	C	C
ss324447416	CHEV_13_77268617	CHEVERUD	SCREENING_POP	f	SNP				C	C
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	LG/J	SM/J
rs29237910					SNP	C	C	T	C	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr13:77277475 () rs orientation: forward

Symbol	Name	Function Class
Rr284990	regulatory region 284990	763 bp distal
Rr284991	regulatory region 284991	1527 bp proximal
Slf1	SMC5-SMC6 complex localization factor 1	within coordinates
Tssr123275	transcription start site region 123275	1956 bp downstream