rs29240204 SNP Detail

Summary

• ID
  rs29240204
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr13:36393519 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GCCCTGCATC TCACCTGGGC
  AGCACAGTAG AGCTGGCCCT GATGTGGAAG GTGCAGGTGA ACTGGCCCCA AGGGTATGAG
  AGTGGGAGAG CTGGCCCCTC CTCTTGCTGG CAGCAGCATC AGAGGAGCTA GCCTGGGGAG
  TGCTGGAGAA CTAGCCTTGG TGGTGTGTAC ATAGGAGAGC TGGTAGGCTG AATAATTCAG
  Y
  TACCATCCAA GCCCAGATCA AGTGCTTTAA GCTAGTCCAC CACAACATCT ATCTTATCTA
  TGACCTGCTG GAGCAGGTAA AAGGGCTAGT AATGCAGGTC CAAAACTGTA GGATCTCAAT
  GACACAGAAC AACAACAGGC TTTCTGAGAG GAGTCCCAGT GAGGGTCCAG CATTGATAGT
  GGAGCAGAAA GAAGACCATG                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	DBA/2J
ss39058661	mCV22952764	ABI	CRAMUS_MOUSE	f	SNP	T	C
ss148872066	ENSMUSSNP5193027	ENSEMBL	ENSEMBL_Sanger	f	SNP	T	C
SNP Consensus Information
SNP					Consensus Type	A/J	DBA/2J
rs29240204					SNP	T	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr13:36393519 () rs orientation: forward

Symbol	Name	Function Class
Fars2	phenylalanine-tRNA synthetase 2, mitochondrial	within coordinates
Gm40912	predicted gene, 40912	within coordinates
Rr279014	regulatory region 279014	within coordinates
Rr286029	regulatory region 286029	1414 bp proximal