rs29240860 SNP Detail

Summary

• ID
  rs29240860
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr13:59910209 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        TTAGG AATTGAGAGG GTGATACTAC
  Y
  ATGCAGCAGG CAGAGGCCAG GGTCA                                      
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	DBA/2J	LG/J	SM/J
ss39057309	mCV25147810	ABI	CRAMUS_MOUSE	f	SNP	T	C	T
ss149081116	ENSMUSSNP3889267	ENSEMBL	ENSEMBL_Sanger	f	SNP		C	T
ss324358091	CHEV_13_59863756	CHEVERUD	SCREENING_POP	f	SNP				C	C
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	DBA/2J	LG/J	SM/J
rs29240860					SNP	T	C	T	C	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr13:59910209 () rs orientation: forward

Symbol	Name	Function Class
Gm49354	predicted gene, 49354	within coordinates
Isca1	iron-sulfur cluster assembly 1	within coordinates
Rr276825	regulatory region 276825	1409 bp distal
Rr281504	regulatory region 281504	391 bp proximal