rs29243706 SNP Detail

Summary

• ID
  rs29243706
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr13:53291772 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        TACCT CAAGATGCTG GTTAAAACAG
  Y
  TTTACTATCA CTTGCCTAAT AGTTT                                      
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
ss39064423	mCV23267644	ABI	CRAMUS_MOUSE	f	SNP	T	T	C	T
ss149007860	ENSMUSSNP5546613	ENSEMBL	ENSEMBL_Sanger	f	SNP	T	T		T
ss324340309	CHEV_13_53233105	CHEVERUD	SCREENING_POP	f	SNP					T	C
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
rs29243706					SNP	T	T	C	T	T	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr13:53291772 () rs orientation: forward

Symbol	Name	Function Class
Ror2	receptor tyrosine kinase-like orphan receptor 2	within coordinates
Rr388452	regulatory region 388452	1115 bp upstream