rs29244366 SNP Detail

Summary

• ID
  rs29244366
• Variation Type
  SNP
• Alleles
  C/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr13:59754414 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        CATGG AAAGGTAGAG AGGGCGGACA
  S
  TGAACCTGGA GGAGAAACTG ACCTG                                      
  
  S = C/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	LG/J	MOLF/EiJ	MSM/Ms	NOD/ShiLtJ	NZW/LacJ	SM/J	WSB/EiJ
ss39063045	mCV24571958	ABI	CRAMUS_MOUSE	f	SNP		G						C
ss49117062	NES12423834	PERLEGEN	MM_PANEL2	f	SNP	G	G	G	G	C	G	C	C	C	C		C		G	G		G
ss149079040	ENSMUSSNP3548657	ENSEMBL	ENSEMBL_Sanger	f	SNP		G						C					C
ss324357405	CHEV_13_59707961	CHEVERUD	SCREENING_POP	f	SNP											C					C
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	LG/J	MOLF/EiJ	MSM/Ms	NOD/ShiLtJ	NZW/LacJ	SM/J	WSB/EiJ
rs29244366					SNP	G	G	G	G	C	G	C	C	C	C	C	C	C	G	G	C	G

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss49117062	NES12423834	PERLEGEN	MM_PANEL	f	SNP	C/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr13:59754414 () rs orientation: forward

Symbol	Name	Function Class
Gm47246	predicted gene, 47246	938 bp downstream
Naa35	N(alpha)-acetyltransferase 35, NatC auxiliary subunit	within coordinates
Rr276812	regulatory region 276812	1014 bp distal
Rr279913	regulatory region 279913	631 bp distal