rs29244824 SNP Detail

Summary

• ID
  rs29244824
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr13:91600960 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              ACAGACAAGG GTGGTTGTCA
  TGGTCTGTGT GACAGATTCC TGACAGATCA TGATAAGGCA ACCTGGGAAC AAATCACAAT
  CTTGTCATTT ACTAGTGTGT GAAAGACTAT TACAGAAACA ATGCCTGCAT TCAGGTGGAC
  GCAGCTCACT CAGTAGAGTA CCTTCCTAGC ATGCATGAAG CTCTGCTATT TGAACTTAGT
  Y
  ATGCATAAAT GTGGCAAGAG TGATGTGCAT CCCTGTAATC AATACCTTTT GGTATTGCCA
  TCTACTTCTG GATTATTACT TCAAGGTCAT CCTTGGCTAC ATACTGAGTC TGGGGCCAGT
  CTAAGCTATG TGAGACACTG TCTCAAATTA AAAAAAAAAA AAACACGAAC AAACAAACAG
  TTGCTAGGAG AATTAAGTAG                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	C57BL/6J	DBA/2J
ss39064550	mCV25443466	ABI	CRAMUS_MOUSE	f	SNP	C	T	T
ss144922409	ENSMUSSNP3238805	ENSEMBL	ENSEMBL_Sanger	f	SNP	C		T
SNP Consensus Information
SNP					Consensus Type	A/J	C57BL/6J	DBA/2J
rs29244824					SNP	C	T	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr13:91600960 () rs orientation: forward

Symbol	Name	Function Class
Rr277507	regulatory region 277507	160 bp distal
Rr277508	regulatory region 277508	41 bp proximal