rs29246375 SNP Detail

Summary

• ID
  rs29246375
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr13:77196812 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        TAACA CAGCTATGTA ACATAGCCTA
  Y
  TCCTCATTCT TTGTTCACAA AATGT                                      
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
ss39063282	mCV24822636	ABI	CRAMUS_MOUSE	f	SNP	T	T	C	T
ss144698401	ENSMUSSNP7087839	ENSEMBL	ENSEMBL_Sanger	f	SNP	T	T		T
ss324446884	CHEV_13_77187954	CHEVERUD	SCREENING_POP	f	SNP					T	T
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
rs29246375					SNP	T	T	C	T	T	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr13:77196812 () rs orientation: forward

Symbol	Name	Function Class
D13Mit231	DNA segment, Chr 13, Massachusetts Institute of Technology 231	830 bp distal
Rr281681	regulatory region 281681	1811 bp distal
Slf1	SMC5-SMC6 complex localization factor 1	within coordinates
Tssr123272	transcription start site region 123272	1275 bp upstream
Tssr123273	transcription start site region 123273	1018 bp upstream