rs29246816 SNP Detail

Summary

• ID
  rs29246816
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr13:107697837 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        CTCAA GAACTTGGAG CCCTGCAAAG
  Y
  CCAACAGAAA AATGCCCTCC CACTC                                      
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
ss39061786	mCV23869650	ABI	CRAMUS_MOUSE	f	SNP	T	C	T
ss145164103	ENSMUSSNP5508923	ENSEMBL	ENSEMBL_Sanger	f	SNP	T		T
ss324518889	CHEV_13_108351417	CHEVERUD	SCREENING_POP	f	SNP				T	T
SNP Consensus Information
SNP					Consensus Type	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
rs29246816					SNP	T	C	T	T	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr13:107697837 () rs orientation: forward

Symbol	Name	Function Class
Gm31920	predicted gene, 31920	within coordinates
Gm32004	predicted gene, 32004	within coordinates
Rr278138	regulatory region 278138	264 bp proximal