rs29247134 SNP Detail

Summary

• ID
  rs29247134
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr13:94204407 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              ACTCTTCTGA CCTCTGCAGG
  CAGTGAGCTT GTGTGCACTG CCCCCCCCCC CCATATATAT GGTTAAAAAA ATTAAAAACC
  TTAAAAACAC CAAGATAGGT GGTCTCACCC TCACATAATT GGGGTCCCTT TCTCACAGGG
  CTGGTCATAT AGTGACCTGG TCACTTAATA GACATCACTA GTTGAATCTT GACCACCTCA
  Y
  ATTATCCTAA TTAGAAAGTT CAAGTAATAT ACCTAGTTTC TTAGTTTCCT TGGCGTTTCT
  GAGCTTGTCC TGTGTGATTT GGTCTTGTCT GGAAGATGAT ACTGTTCTTT CATTCAATGA
  AAGCATTCTA AAAGTGTATC TGTGGTGCTA AGTCAGTTAA ACACACTGGG TCTCTGTGTT
  ACTAATAAGA GCTGCTCCTC                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
ss39065804	mCV22562358	ABI	CRAMUS_MOUSE	f	SNP	C	T	C	C
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
rs29247134					SNP	C	T	C	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr13:94204407 () rs orientation: forward

Symbol	Name	Function Class
Lhfpl2	lipoma HMGIC fusion partner-like 2	within coordinates
Rr274132	regulatory region 274132	7 bp distal
Rr285346	regulatory region 285346	195 bp proximal
Tssr120664	transcription start site region 120664	652 bp upstream