rs29249524 SNP Detail

Summary

• ID
  rs29249524
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr13:74510521 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        TTACT TTCTAGTTCC TCTTTCTCAT
  R
  TCTTCTTCCT TCTACCTCCT CCTCC                                      
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
ss39067673	mCV22892679	ABI	CRAMUS_MOUSE	f	SNP	A	A	A	G	G
ss144626982	ENSMUSSNP1462297	ENSEMBL	ENSEMBL_Sanger	f	SNP					G
ss324435770	CHEV_13_74499850	CHEVERUD	SCREENING_POP	f	SNP						A	G
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
rs29249524					SNP	A	A	A	G	G	A	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr13:74510521 () rs orientation: forward

Symbol	Name	Function Class
Ccdc127	coiled-coil domain containing 127	within coordinates
Lrrc14b	leucine rich repeat containing 14B	within coordinates
Rr482679	regulatory region 482679	1593 bp proximal
Tssr123216	transcription start site region 123216	1518 bp downstream
Tssr123217	transcription start site region 123217	1535 bp downstream
Tssr123218	transcription start site region 123218	1569 bp downstream
Tssr123219	transcription start site region 123219	1591 bp downstream