rs29250410 SNP Detail

Summary

• ID
  rs29250410
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr13:20790963 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        ATTCC TTTTATATTG CTGCTTCCTC
  R
  GCATACTTTC CCATTATTGT CTCCT                                      
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	A/J	AKR/J	BALB/cByJ	C3H/HeJ	C57BL/6J	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	LG/J	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	SM/J	WSB/EiJ
ss39066497	mCV24006484	ABI	CRAMUS_MOUSE	f	SNP		G	A				G		A
ss61757674	NES17682598	PERLEGEN	MM_PANEL2	f	SNP	G		A	A	A	A		G	A	A	A		G	A	G	G		A
ss148771582	ENSMUSSNP3275086	ENSEMBL	ENSEMBL_Sanger	f	SNP		G	A						A
ss324282850	CHEV_13_20698662	CHEVERUD	SCREENING_POP	f	SNP												A					A
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	A/J	AKR/J	BALB/cByJ	C3H/HeJ	C57BL/6J	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	LG/J	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	SM/J	WSB/EiJ
rs29250410					SNP	G	G	A	A	A	A	G	G	A	A	A	A	G	A	G	G	A	A

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss61757674	NES17682598	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr13:20790963 () rs orientation: forward

Symbol	Name	Function Class
Elmo1	engulfment and cell motility 1	within coordinates
Gm60937	predicted gene, 60937	1312 bp downstream
Tssr118599	transcription start site region 118599	1379 bp downstream
Tssr118600	transcription start site region 118600	1332 bp downstream