rs29266241 SNP Detail

Summary

• ID
  rs29266241
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  ChrX:134621646 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CCCATCACTC TGTGACTGGA
  CAGATGGCTG TGACATCATA CCTATGAGTC ACGGGCCTCT CTGATTGGAT GGCAATCCTT
  ACTTGCCACA TAACCGCCCC CACCACCATG CTTTTAGCTT TATGGGTGCC TCGGTTCAAC
  TTCAGAACCT CTGCTTATTT AGACTGTTTG ATTATAAGAA ATTTTTTATA TAGTCTTTGC
  Y
  TCCTTGTACA ACAACTGGAA ATCATTACCA CCTAAGAAAA GACAAATATT CTAGCTGGGG
  AATCTGGATT CCACACATTT GTAACTGCAG GGGGTGTGTG TGGAAAGGCA TTTGTCTGGG
  TTGTGCCATT TACAAATAAC TTGTCACTGC CAAGCCTAAG GGGCAGAGGG TCACGAGTCA
  GACCTAGAAA GCCATTTCCC                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss38460143	NES09761426	PERLEGEN	MM_PANEL2	f	SNP	T	T	T	C	T	T	C	T
SNP Consensus Information
SNP					Consensus Type	A/J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs29266241					SNP	T	T	T	C	T	T	C	T

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss38460143	NES09761426	PERLEGEN	MM_PANEL	f	SNP	C/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: ChrX:134621646 () rs orientation: forward

Symbol	Name	Function Class
Gm61763	predicted gene, 61763	342 bp upstream
Tmsb15a	thymosin beta 15a	within coordinates
Tssr164175	transcription start site region 164175	256 bp upstream