rs29269666 SNP Detail

Summary

• ID
  rs29269666
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  ChrX:132773840 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GAACTCTTTG TTTTTACAAA
  GCTTAAGAAC AACAGACTTA CTGTGCTCCC TACTGGTAAA ATCAAGAGCT ACAGCAGTAT
  CAAACACTTT AGGAAAGCTT TATAGAGCTA GGCATTAGCA ATTACTTTAC AGTGATAATA
  TCTTGCTGCT GAGTTCATAA ATTACAAGAC AACATTAGCA GGAAAGCAAC TTTAGAGCTG
  Y
  TCCAGCGTCA AGGTGAATAT GCATTCAGAT ACCAGTATCA TTTGAGATCA TGGTCAGTAT
  CACCAGCTGT TGCTGTATGC TAGACAAACC ATATCTAAAT ATACCCCGAC TCAATGGTTC
  TCACACTGTC CTCTGCATCA CAAGTTCCTT GGGGGCCTGT TCAAAGTATG CAGTCTTAGC
  TCCATGGTCG AGGAATTCAG                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss38464218	NES09781068	PERLEGEN	MM_PANEL2	f	SNP	T	T	T	T	T	T	T	T	T	T	T	T	C	T
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs29269666					SNP	T	T	T	T	T	T	T	T	T	T	T	T	C	T

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss38464218	NES09781068	PERLEGEN	MM_PANEL	f	SNP	C/T