rs29282549 SNP Detail

Summary

• ID
  rs29282549
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  ChrX:143130921 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              ACACCAGGGC CAAAAAGGAG
  GAGTGGGTGG GCAGGGGAGT GGGGGTGGGT GGATATGGGG GACTTTTGGT ATAGCATTGG
  AAATATAAAT GAGTTAAATA CCTAATAAAA AATGGAAAAA AAAAAGAAAT AGACATTGAA
  TTATGTTTGG AGAAATGGTT GTTTGATTAA GCACAGATTT GTCAGTAGAC AAGACCAGAT
  R
  TATTAATATA AGACTCCCTT TTCCGGTCTT TCAGGTTTGC ATGGAATCAG GTGGAAAATA
  TTATAATGCT CACATTCAGG AAATTGATAA TGATAAAAGT TCAGTAGTAG TTTTCATTGA
  GGAATTTGCA GAAAGGTAAG ACTGTATAGA AATTAAAATT GCCAGGTGCT TACTCATATT
  AAGTTGAGAA TTTCCAGGAT                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	PWD/PhJ	WSB/EiJ
ss38476575	NES09754568	PERLEGEN	MM_PANEL2	f	SNP	A	A	A	A	G	A	A	A	G	A	G	A
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	PWD/PhJ	WSB/EiJ
rs29282549					SNP	A	A	A	A	G	A	A	A	G	A	G	A

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss38476575	NES09754568	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: ChrX:143130921 () rs orientation: forward

Symbol	Name	Function Class
Alg13	asparagine-linked glycosylation 13	within coordinates