rs29294655 SNP Detail

Summary

• ID
  rs29294655
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  ChrX:149898046 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              AATTTCTAAC TGTTGGGTCT
  TACCTATAAT GGTATCCATG AACTATGAAT TTCAGATGAG GGTTTTAATC AAAGATTAAT
  ATTTATAGAG AAAAGTGTGT TTCATTTCTA TTTATTGAAA TAAGAACTTT CTGAAAGAAT
  CATATCAATG GTAACAATCT GCTACAGCCT GATATTTTGA AGTTAGAAGA TCTACTTTCT
  R
  GTAAGAAGTT GAGACAAAAA CTCTAATCAC CTTTTAAATA TATCTCTTTC AAGCCTTCAG
  TAAACTATTG TATTTTTAAT GTTAAATGTT TTGAACACAT ACTTTCAATA ACTTAAACAG
  TAAATGGGAA TACTGTTGTT TGTCCATTTT TTCTGTTATC TTCAATATAT GACAGTATTA
  TGTTTGAAAA CCCATTTTAT                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	NOD/ShiLtJ	PWD/PhJ	WSB/EiJ
ss38490538	NES09751284	PERLEGEN	MM_PANEL2	f	SNP	G	G	G	G	G	G	G	G	G	G	A	G
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	NOD/ShiLtJ	PWD/PhJ	WSB/EiJ
rs29294655					SNP	G	G	G	G	G	G	G	G	G	G	A	G

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss38490538	NES09751284	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: ChrX:149898046 () rs orientation: forward

Symbol	Name	Function Class
Rr3245	regulatory region 3245	1755 bp proximal
Rr9350	regulatory region 9350	1733 bp proximal