rs29295562 SNP Detail

Summary

• ID
  rs29295562
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  ChrX:150916800 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              ATTTGGACCA CATGATCTCT
  AAAGTTCCCT TTAAACTCTG AACACCAGCC CATGGTGTAA TGAGCAATGG AAAGGACTTT
  TTGGTTCCTT TCCCCCTATA AGAATCATAT GGAATAGGAC TGGGTTAGTG CAGGCTTGGG
  TTCTGTTTAT AGCTCATTAT TCCCTTTATG AATGTCTCTG AAGTGGTCAA GGTTCATTTG
  R
  GCTAGAATAT CCCAGTATTT GGTGAATCTT TGCTTCTTTT CTGTTCTCCC TCCATACCTT
  TCTCTTTTCC ATCCTGTCTT CTAATTTACA GCTAGGATGA TGTCTTTCAC ATGGTAGGGC
  CATAAAGGGA CTTTGAAACC ATCTTATTTA ATATGTTTCC ACTCTCTATT GCAACAGACC
  CTCCAAATGA TACCATCCAG                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	CAST/EiJ	MOLF/EiJ	PWD/PhJ
ss38488865	NES09735372	PERLEGEN	MM_PANEL2	f	SNP	G	A	A
SNP Consensus Information
SNP					Consensus Type	CAST/EiJ	MOLF/EiJ	PWD/PhJ
rs29295562					SNP	G	A	A

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss38488865	NES09735372	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: ChrX:150916800 () rs orientation: forward

Symbol	Name	Function Class
Rr3276	regulatory region 3276	1400 bp distal
Rr3277	regulatory region 3277	801 bp proximal