rs29295563 SNP Detail

Summary

• ID
  rs29295563
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  ChrX:150916722 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TCCAGATGCT GAAATTACAG
  GCATGAGCCA CCACAGCCAG CTCCCTCTGA GTCTCTTTAT TGGGTCATAA AACAAGGGAT
  TTGGACCACA TGATCTCTAA AGTTCCCTTT AAACTCTGAA CACCAGCCCA TGGTGTAATG
  AGCAATGGAA AGGACTTTTT GGTTCCTTTC CCCCTATAAG AATCATATGG AATAGGACTG
  R
  GTTAGTGCAG GCTTGGGTTC TGTTTATAGC TCATTATTCC CTTTATGAAT GTCTCTGAAG
  TGGTCAAGGT TCATTTGAGC TAGAATATCC CAGTATTTGG TGAATCTTTG CTTCTTTTCT
  GTTCTCCCTC CATACCTTTC TCTTTTCCAT CCTGTCTTCT AATTTACAGC TAGGATGATG
  TCTTTCACAT GGTAGGGCCA                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	CAST/EiJ	MOLF/EiJ	PWD/PhJ
ss38488866	NES09735370	PERLEGEN	MM_PANEL2	f	SNP	G	G	A
SNP Consensus Information
SNP					Consensus Type	CAST/EiJ	MOLF/EiJ	PWD/PhJ
rs29295563					SNP	G	G	A

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss38488866	NES09735370	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: ChrX:150916722 () rs orientation: forward

Symbol	Name	Function Class
Rr3276	regulatory region 3276	1322 bp distal
Rr3277	regulatory region 3277	879 bp proximal