rs29295909 SNP Detail

Summary

• ID
  rs29295909
• Variation Type
  SNP
• Alleles
  A/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  ChrX:150915718 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              ACTTTCACAA AGCTGTGTGT
  GTTGTTCTCC CTATGGTTGC CTAGCAGCAC AGACATTTCA TCAGGCCATC CTAGACTAGC
  CTCATTGATG CCCAAACTGG CTATCTCCTT CCTAAGGAAG TGATTTGGAT ATACTGCCTT
  ATATCCCTTA TCACACTAAA TTGTAATTAT GATATATGTA TCTATATATT CGGGTGTTAG
  W
  CCAGGCATCC AAAAAGTATG GATTGCTTAT TGCTTACCTA CCATGTACCA GGATTTTTAC
  TATACCTATG ACATTGAACG TGAAGTGTAA CAATAGACAG AGAAACACCT ACCCTTGAGT
  GTTAACAGTT CGAAGAAGGA AACAGATGGT GAGCAACAAA GAACTGCACC AGTCAATATG
  CAATTATAAA CTTGCTGTGC                                            
  
  W = A/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	CAST/EiJ	MOLF/EiJ	PWD/PhJ
ss38488872	NES09735449	PERLEGEN	MM_PANEL2	f	SNP	A	T	T
SNP Consensus Information
SNP					Consensus Type	CAST/EiJ	MOLF/EiJ	PWD/PhJ
rs29295909					SNP	A	T	T

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss38488872	NES09735449	PERLEGEN	MM_PANEL	f	SNP	A/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: ChrX:150915718 () rs orientation: forward

Symbol	Name	Function Class
Rr3276	regulatory region 3276	318 bp distal
Rr3277	regulatory region 3277	1883 bp proximal
Rr9364	regulatory region 9364	1718 bp distal