rs29300920 SNP Detail

Summary

• ID
  rs29300920
• Variation Type
  SNP
• Alleles
  A/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  ChrX:153929283 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              ATCCTGATAT ATACATACAG
  TGCATTAGAG CTTGCATGTG GACTTATGAG AGAAAAGGCT TGAGTGGGAA GTAATGGAAT
  CTCACACAAA GTGTAAGAGG GTGGTGAAAG GAGATTTGTC TCCCAAAATG AGCAAAAACT
  GTCTGCCATC TCTCCAAAGT TTATAAAAGA AAATTGAAAA TATTTTGAGA TATAATAGGA
  W
  GTGTTTCAAG TCGTCTTGGC TCACACCTCA GACTCATTGT GTTATCAGCA TTTACCTCCA
  TTCAAAGCTT CCTTTGTAGA TCTCACAGAA TTGCCTGCCC TCTCACAGAA AGAAATCATC
  ATTCTGACCA CTTAAACATG TCCTTTTTTT TTTTAATGAA AGGCTGCTGC TTCCCATTCC
  TTCTTTCATG AATGTGCTAA                                            
  
  W = A/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss38495863	NES09734179	PERLEGEN	MM_PANEL2	f	SNP	T	A	T	A	T	T	T	T	T	T	A	T	T	A
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs29300920					SNP	T	A	T	A	T	T	T	T	T	T	A	T	T	A

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss38495863	NES09734179	PERLEGEN	MM_PANEL	f	SNP	A/T