rs29301284 SNP Detail

Summary

• ID
  rs29301284
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  ChrX:153928935 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              ACATGTCTTC AAACTTCTTG
  GGGTAAATCA GTCACTGATT AAGCTGGCCA AACTTAAACA TGTACATCAG GTAATGCAAG
  AACTTCAGAG AGACCATCAG CACCTGAAAT TCACCTATCT TTTTTATATT CCAAAAATTC
  CTAGTACATG GAGGATTTTT CAGATGAGGC CAATAGATCA AACAAGGAGT CATTAACATG
  R
  CATGTTGAGG CTGGAATGTG CTGTTCTCTT ATTATTCCTG GAGCAAACAC TACAAAGTAG
  AAGAAACTTC TGGCTGTCCC ATTTGCCTTC AAAACATTTC CAGATCAGTC CTTCCAGTTC
  ATTGACTCTT ATTATGTGGC TCAAGGCATC CTGATATATA CATACAGTGC ATTAGAGCTT
  GCATGTGGAC TTATGAGAGA                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	PWD/PhJ
ss38495867	NES09734175	PERLEGEN	MM_PANEL2	f	SNP	A	A	A	G	A	A	A	G	G
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	PWD/PhJ
rs29301284					SNP	A	A	A	G	A	A	A	G	G

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss38495867	NES09734175	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: ChrX:153928935 () rs orientation: forward

Symbol	Name	Function Class
Rr694555	regulatory region 694555	907 bp distal
Rr694556	regulatory region 694556	1016 bp distal