rs29301287 SNP Detail

Summary

• ID
  rs29301287
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  ChrX:153928217 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              AAACCAAAGA CAATGAGAGA
  TTTGATTACT ACCACTAAAA TTAATTCGAG ATTAGACTTA CCTATAACCA AAGACATAAA
  ATTAGATTTA ATAAGAGGGG TAAAGAGAAT CCCCACAATT CTATGTGGAC CCCTTCCAAC
  AGACTGCCCT GGGCTTGGTA TTAGGCATAT CAAATTGGAT TATAAAAGAA ATTTTGTTTG
  Y
  CCAGATATAT TTGATTCAGA TTATACTGAT CAAATTTATA TTATGATTTT CCCAGCTACT
  CCAAGAAATT CCAGTTCTAA TTTAATTTGT ACAATTGCTT ATTATTCCTT ATCTGATCAT
  ATAAATCCTT GATTAAAGTT ACCAAGATCA AGAACTTGGT TTCTCAAACT CATACTTGAC
  TCAGTGTAGC ATATAATATA                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss38495870	NES09734172	PERLEGEN	MM_PANEL2	f	SNP	C	C	C	C	C	C	T	C	C	C	C	C	C	C	C
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs29301287					SNP	C	C	C	C	C	C	T	C	C	C	C	C	C	C	C

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss38495870	NES09734172	PERLEGEN	MM_PANEL	f	SNP	C/T