rs29301290 SNP Detail

Summary

• ID
  rs29301290
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  ChrX:153927648 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CCACTGTCAG ACAAAATTCT
  ACAGAGCTCT TTATGTACAG TGTTGTACAA GCTATATAAA GACAAATAGA TAATAATGAT
  GTGGAGGCCA CTTCATCTCT TTCGTTAACC TATGAAAATG CACATTCTAA TTGCAAAAAC
  CCCTTCATTC TGTAGTAGCT ACTCTTTTCA CACTACTGTT GACAGAACAA AAGCATGCCA
  R
  AATGTTGGCA CAGAGGATCA TAAAGCGCAG AATCTAAGTG CTTCAAATGT GTAAAAAGAG
  GACACTACCA AAAATAATGG AAACAAAAAC TTGCTAATAA ACCTCAGTAT AATAGGACTT
  CCTCTCCCCC TCCCCCTCCC CCTCCCCGCC TCCAAAAAAT AGGTCAAAAT GTAAAAAGGG
  CCAATCATTG TGATCTAGAA                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss38495873	NES09734169	PERLEGEN	MM_PANEL2	f	SNP	G		A	G	A	G	G	A	G	G	G	A	A	G	A	A
ss46492631	mCV23894524	ABI	CRAMUS_MOUSE	f	SNP	G	A	G						G
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs29301290					SNP	G	A	?	G	A	G	G	A	G	G	G	A	A	G	A	A

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss38495873	NES09734169	PERLEGEN	MM_PANEL	f	SNP	A/G