rs29302894 SNP Detail

Summary

• ID
  rs29302894
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  ChrX:160211144 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TGACATCTCT TTTCAAATCA
  TCCTGAAGAC CAAGGCTATT CTGGATACAC ATGCATGCAT GTGTATGTTT GTATGTAAAC
  ACGCAAACAC ATAAAGGCAC ACACTCACCA AGTCAGAAAA TCCTATTTAA GTCTCCCCTT
  CTGTCTGAAT TTATCTGCTA TTTCCCAAGA GCAAAGTGAG AGTGTGAAGA AAAAAAGGGC
  R
  TGTTAATGAG CAGATTACTG CAGGGGGGGG GGGTGTCCCC TGGACTTATG CCTGCTGAGT
  CATCTCTGAG AGCATGTCAA ACAAGATGCA AAAATACCGG TGAGGGGCGG GGCAGGGCAG
  TTGGGATATT TACCATACAG CATACTCACA TTTCATTGTT AGCATTTATG GTATACTCTG
  CAACAGCTTG TGAATGTTAC                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss38499006	NES09729722	PERLEGEN	MM_PANEL2	f	SNP	G	G	G	G	G	G	G	G	G	G	A	G	G	A	G
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs29302894					SNP	G	G	G	G	G	G	G	G	G	G	A	G	G	A	G

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss38499006	NES09729722	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: ChrX:160211144 () rs orientation: forward

Symbol	Name	Function Class
DXMit121	DNA segment, Chr X, Massachusetts Institute of Technology 121	1749 bp proximal
DXMit121.1	DNA segment, Chr X, Massachusetts Institute of Technology 121.1	1601 bp proximal