rs29314328 SNP Detail

Summary

• ID
  rs29314328
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr10:122526788 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              ACATTACAGT TCCTAACAGT
  AGCAAAGTTA CAGTTATGAG GCAGCAAATG CAAATAATTT TAGAGTTGGG GGGTCACCAC
  AACATGAGGA ACTGTATTAA AGGATTGCAG CATCAGGGAG GTTAAGAAAC GCTGTCCCAC
  ATCTCAGCAT TCAGATTGCT GAGAGCTTTG CATGGGGTTA ACCTGGAAAA TGTCTCTTGC
  Y
  GTGGTTCCTG TTTCATTTCA TCATGAATGG GTTGTTGGAA ACTTGAGTCA TCCTTCCAGC
  CAGGGGCCGA TCAAGTGACT GTTATCCAAG AGCATTCTTT AATAAAGACT CCAGGCCGGA
  GCCTGAACAG TGCTCAGGAT GAATCAAGAC GTTCTCGGCC TGTGACCTCT TAGCTTGGAA
  GCAGAGACTG TTTGCTAGGA                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J
ss38515852	mCV23854509	ABI	CRAMUS_MOUSE	f	SNP	C	C	T
ss147651245	ENSMUSSNP5276079	ENSEMBL	ENSEMBL_Sanger	f	SNP	C	C	T
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J
rs29314328					SNP	C	C	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr10:122526788 () rs orientation: forward

Symbol	Name	Function Class
Ppm1h	protein phosphatase 1H (PP2C domain containing)	within coordinates
Rr226290	regulatory region 226290	1614 bp proximal