rs29314432 SNP Detail

Summary

• ID
  rs29314432
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr10:117838865 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        TCTCTCTCTC TCTCTCTCTC TCCCTCTCTC CCTCCTTCCC
  TCCTTTCCTC CCTCTTAGCT TGAGCCATCT CTCAGTTTAA GTTAGCTAAC AGTCAGGCAT
  R
  GTAACACACA GGGAAAAACT CACATAAAGT GGAAGGGAAA AACTCCTCAG GAGGAGTGAG
  GCAGAAGGAG GATCATGAGC CCAAGGCAAA TATTGGTAA                       
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	A/J	AKR/J	C57BL/6J	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	LG/J	MOLF/EiJ	PWD/PhJ	SM/J
ss38515915	mCV24218854	ABI	CRAMUS_MOUSE	f	SNP	A	A	G		A		G
ss52224751	NES15323638	PERLEGEN	MM_PANEL2	f	SNP	A		A	A		G		A	G		G	G
ss147591161	ENSMUSSNP5637217	ENSEMBL	ENSEMBL_Sanger	f	SNP		A	G				G
ss323501173	CHEV_10_117440016	CHEVERUD	SCREENING_POP	f	SNP										G			A
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	A/J	AKR/J	C57BL/6J	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	LG/J	MOLF/EiJ	PWD/PhJ	SM/J
rs29314432					SNP	A	A	G	A	A	G	G	A	G	G	G	G	A

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss52224751	NES15323638	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr10:117838865 () rs orientation: forward

Symbol	Name	Function Class
Gm37852	predicted gene, 37852	1978 bp upstream
Igs80	intergenic site 80	505 bp distal
Rr226004	regulatory region 226004	within coordinates