rs29316098 SNP Detail

Summary

• ID
  rs29316098
• Variation Type
  SNP
• Alleles
  G/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr10:68053176 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              AATCATGGCT CTGAGAAAGA
  AAATCCAGGC CTGGCTTTTT AAAATAGATT TTACAGAACT GGGAATATGG CTTAGCACTT
  AGAGAGCTTA AATATGAGGA TTGGCATTGG ATCTCCAGAA CCTAAGTAAA TGCCTTGTGG
  GCATGGCCCA GTTGCACTTT TTACCACAGC ATGCAGAGAC AGGGGATTCT AACAGTAAGC
  K
  GGCAAGTGGC TCTAGGCATA TAGGCCAGTT CTGGGTTTCA CTAAGAGACC CTGCCCTGAG
  GAGTAAGATG AAAAAGGATA ATTCTGAACA TCAACCTTGT GCCTCCCAGG TGCATGTGCA
  CTCGTACCCT CTACATGTGC ATCCATACAC AGGAAGAGTG TGCATACACC ACCATCACCA
  TCACCACTAT CACCATCACC                                            
  
  K = G/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J
ss38523109	mCV24237451	ABI	CRAMUS_MOUSE	f	SNP	G	T	T
ss147148774	ENSMUSSNP186843	ENSEMBL	ENSEMBL_Sanger	f	SNP	G	T
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J
rs29316098					SNP	G	T	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr10:68053176 () rs orientation: forward

Symbol	Name	Function Class
Arid5b	AT-rich interaction domain 5B	within coordinates
Gm51770	predicted gene, 51770	within coordinates
Rr433221	regulatory region 433221	1409 bp proximal
Tssr98005	transcription start site region 98005	1502 bp downstream