rs29319929 SNP Detail

Summary

• ID
  rs29319929
• Variation Type
  SNP
• Alleles
  G/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr10:27956406 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        AGAAG TGTGCCTGTC TGTAGTCTTC
  K
  ATTCTTATGG GGACCTTTCG GTTGT                                      
  
  K = G/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
ss38529487	mCV23522911	ABI	CRAMUS_MOUSE	f	SNP	T	T	T	G
ss323281684	CHEV_10_27800216	CHEVERUD	SCREENING_POP	f	SNP					T	G
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
rs29319929					SNP	T	T	T	G	T	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr10:27956406 () rs orientation: forward

Symbol	Name	Function Class
Ptprk	protein tyrosine phosphatase receptor type K	within coordinates
Rr214336	regulatory region 214336	1806 bp distal
Rr219035	regulatory region 219035	1195 bp proximal
Rr222425	regulatory region 222425	within coordinates