rs29320286 SNP Detail

Summary

• ID
  rs29320286
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr10:5310447 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        TTTAG CTACCGCTTC ACGAGTAGTC
  R
  ATGAGTATTA CTTGCTGCCT TTCTG                                      
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	C57BL/6J	DBA/2J
ss38530922	mCV23712687	ABI	CRAMUS_MOUSE	f	SNP	G	G	A
ss146737432	ENSMUSSNP5889750	ENSEMBL	ENSEMBL_Sanger	r	SNP	C		T
SNP Consensus Information
SNP					Consensus Type	A/J	C57BL/6J	DBA/2J
rs29320286					SNP	G	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr10:5310447 () rs orientation: forward

Symbol	Name	Function Class
Rr222920	regulatory region 222920	145 bp proximal
Rr384081	regulatory region 384081	within coordinates
Syne1	spectrin repeat containing, nuclear envelope 1	within coordinates