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rs29320809 SNP Detail
Summary
  • ID
    rs29320809
  • Variation Type
    SNP
  • Alleles
    C/G
Genome Location and Flanking Sequence
  • Location
    Chr10:89622332 (GRCm39)
  • SNP Orientation to the Genome
    forward
  • SNP Reference Flanking Sequence
                          TAGCACTGCT TTCATTGTGT TCCATAAGTT TGGGTATGTT
    GTACCTTCAT TTTCATTAAA TTCTAAAAAG TCTTTAATTT TTTTTCACTA TTTCTTCCCT
    S
    ACCAAGTTAT CATTGAGTAG AGTTGTTCAG CTTCCACGTG TATGTGTGCT TTCTGTTGAT
    TTTGTTGTTG AAGACCAGCC TTAGTCCATG GTGATGATG                       
    
    S = C/G
    

    Note: Sequence in lower case indicates low-complexity or repetitive sequence
    BLAST SNP flanking sequence against the mouse Genome
SNP Assays
and
SNP Consensus
Strain alleles of submitted assays, and consensus values for this SNP
Legend
Assay ID Submitter
SNP ID
Submitter
Handle
Population
ss orientation
Variation Type
129X1/SvJ
A/J
C57BL/6J
DBA/2J
ss38534471 mCV23617855 ABI CRAMUS_MOUSE f SNP C C C G
SNP Consensus Information
SNP Consensus Type
129X1/SvJ
A/J
C57BL/6J
DBA/2J
rs29320809 SNP C C C G
Gene/Marker
Associations
and
Function
Classes
MGI genes/markers associated with the SNP
Location: Chr10:89622332 () rs orientation: forward
Symbol Name Transcript Protein Function
Class
Allele Residue Codon
Position
AA
Position
Bltp3b bridge-like lipid transfer protein family member 3B within coordinates
Tssr95182 transcription start site region 95182 629 bp downstream

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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Funding Information
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last database update
12/17/2024
MGI 6.24
The Jackson Laboratory