rs29321945 SNP Detail

Summary

• ID
  rs29321945
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr10:8234307 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GAACCAACTG AGGAAATTGT
  GCAACACGAC GAAGAACCAG CTCTCCAAAG AGATTTGTTT GCAATGTACT GCCCTCTGTA
  CTTATCAGAG ACTGAGTCAT CATCACAGGA TAGAGAACGC AGAACTCCAG AGACTGATCT
  GCCACGTCTG ATAACTCTCG GTCATCATTT CTTGCCAAAG CAACTAAAAA CAGGCCCCAA
  Y
  CAGCCAGGAA AGCTTGTCTG TCTCTCTTCA TGGATAACTT ATGGAAGCCA TTACAGTCTA
  GAGCAGGGTA GATGACACGT CTCCATCCTG TGTTCTTACA TTACATATGG AGCTATGGAA
  ATTCCCGAAG AGGAGAATTT AATGGAAGTC AGTCACAGGA TGAGCTTCCT TTGTCCTTTG
  TTGGTGCCAG TTAAGTGTGT                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
ss38535327	mCV23362194	ABI	CRAMUS_MOUSE	f	SNP	T	C	C
ss146763107	ENSMUSSNP3928896	ENSEMBL	ENSEMBL_Sanger	f	SNP	T		C
ss323245086	CHEV_10_8078341	CHEVERUD	SCREENING_POP	f	SNP				T	T
SNP Consensus Information
SNP					Consensus Type	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
rs29321945					SNP	T	C	C	T	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr10:8234307 () rs orientation: forward

Symbol	Name	Function Class
D10Mit305	DNA Segment, Chr 10, Massachusetts Institute of Technology-305	1171 bp proximal
Tssr96626	transcription start site region 96626	187 bp upstream
Ust	uronyl-2-sulfotransferase	within coordinates