rs29322205 SNP Detail

Summary

• ID
  rs29322205
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr10:122819220 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        TGATG CAGTTCATTT TTGAGGATGA
  Y
  GGCTCCATTT GCTTTCTGAC TGCAG                                      
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	DBA/2J
ss38531936	mCV23855840	ABI	CRAMUS_MOUSE	f	SNP	C	C	C	C	T
ss147655477	ENSMUSSNP1519149	ENSEMBL	ENSEMBL_Sanger	f	SNP		C	C		T
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	DBA/2J
rs29322205					SNP	C	C	C	C	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr10:122819220 () rs orientation: forward

Symbol	Name	Function Class
Cpgi2309	CpG island 2309	1924 bp proximal
Gm63655	predicted gene, 63655	1759 bp downstream
Rr402310	regulatory region 402310	1607 bp upstream
Rr440468	regulatory region 440468	within coordinates
Rr440469	regulatory region 440469	600 bp proximal
Tssr99655	transcription start site region 99655	969 bp upstream