rs29322931 SNP Detail

Summary

• ID
  rs29322931
• Variation Type
  SNP
• Alleles
  A/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr10:126599105 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TTCTTAACCA GTAGTTTAAA
  ATCAAGGAAC AAGGTTTGCA CAACAAAAGC TTGTCACTAG CATTACAATA TACAGCAATG
  AACCAAACCT CAACAATGAA AGGACAGGGA AATGAGTAGG ATTGGGGTAT ACTCTGTGAA
  CCCCAATTAT TATTATTCAT AAATTATTAT TATTCATAAA TAAATAAATA AAAATCAATT
  W
  AAAAATTCTT GGAAAAGAAG ATTGCATGTA ATTAAGAAGC ACGTAATTAA GAAATAATTG
  CAAAAGAAAT AATAGACTTA AGGGACAACC TTTAGAGCAA GAGAAAACAT TTGCAAGCTA
  TGCATCCCAT AAGTTTGATA GTTGGGATAT ATAAGAAAAT TTGAGGGGAA TAAAAGATAA
  AAAAAAATTA AAATTCAGAA                                            
  
  W = A/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
ss38533186	mCV23467046	ABI	CRAMUS_MOUSE	f	SNP	A	A	T	T	T
ss323527913	CHEV_10_126200292	CHEVERUD	SCREENING_POP	f	SNP						T	A
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
rs29322931					SNP	A	A	T	T	T	T	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr10:126599105 () rs orientation: forward

Symbol	Name	Function Class
Rr213450	regulatory region 213450	1496 bp proximal
Rr221937	regulatory region 221937	1645 bp proximal
Rr226427	regulatory region 226427	496 bp proximal
Rr385452	regulatory region 385452	4 bp upstream