rs29325269 SNP Detail

Summary

• ID
  rs29325269
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr10:127317427 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        GAGAT GTGGAAGTCA CAAGCTATCC
  Y
  GGGCTTGGCG GGCAGCCTGC TCAAC                                      
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
ss38537691	mCV22969182	ABI	CRAMUS_MOUSE	f	SNP	C	T	C	C
ss147732476	ENSMUSSNP6404798	ENSEMBL	ENSEMBL_Sanger	f	SNP	C	T		C
ss323529605	CHEV_10_126918614	CHEVERUD	SCREENING_POP	f	SNP					T	C
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
rs29325269					SNP	C	T	C	C	T	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr10:127317427 () rs orientation: forward

Symbol	Name	Function Class
R3hdm2	R3H domain containing 2	within coordinates
Rr213569	regulatory region 213569	1827 bp distal
Rr213570	regulatory region 213570	27 bp distal
Rr218482	regulatory region 218482	within coordinates
Tssr96215	transcription start site region 96215	89 bp upstream
Tssr96216	transcription start site region 96216	132 bp upstream