rs29325605 SNP Detail

Summary

• ID
  rs29325605
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  125
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr10:86287923 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                                                   
  GTTACTCTCC TCTCTCCATT CTTCACTCTG CACCCCTGCA GATTCCAGTG TTCTTCTCCC
  TAGTACTTGA CCTTCTCATC AACCCCCAAG AGGGAATGGG GCAGGATCGC CACCCATATC
  CTGTAGATGG AGAAGTTGCC ATTTAAGGTC TCATAAGTTT CCCATAGTTT CAGATTTTCA
  AGATTCAGTA CAATTCCTTC CTAATGGGGA CTCTGCCAGC AGATGGCCCA CTTAATCCAC
  ATTTACATTA CATTAACATC CACATTATTT ACAGCTGCTT CCATAGACAC CACACACCCC
  M
  CACACACACA CACACACACA CACACACACA CACACACACA CCACACATGC ACATGCACGC
  GAGCATGCAC GCGCGCGCAC GCACGCACGC GCGCGCACAC ACACACACAC ACACACTCCT
  TCTTGGGATG CTTCAGTACG TCCTCTGCTT TATGATTCTG GTCTTTTGCA CAGGCTCACA
  CCTCTATTTT GCCAGACTCC TCTTTCTCGA AGTCCATAGT ACTTATAGGT GCTATCTGCT
  CTCTTGTTTT CCTTAGCAGC AACCCCACCT GGCTGGGCTG GGTGCCCCTC CTCCACAGGT
                                                                   
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J
ss38542256	mCV23610123	ABI	CRAMUS_MOUSE	f	SNP	A	A	C
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J
rs29325605					SNP	A	A	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr10:86287923 () rs orientation: forward

Symbol	Name	Function Class
Rr217202	regulatory region 217202	within coordinates
Rr229241	regulatory region 229241	within coordinates
Syn3	synapsin III	within coordinates