rs29328694 SNP Detail

Summary

• ID
  rs29328694
• Variation Type
  SNP
• Alleles
  G/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr10:3672983 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TGCATATTAA TAAAGAAGAG
  GGCTTTATAA AAACTCACTG TTGCGTACAG GGATCCACAA GGGATCACAG TGCAATGATT
  ATTATATTCA CACAACTAAA GAGGTAGGTA GAGTGGGTTC CCTTGTGTTG GGCTTTGCAT
  TCTTAAAAGG AAGTAGGCTT TGGAAGAACT TATCCATAAA ATCTGCAGAA TGAACTCAAC
  K
  CCAGCAATTA GATTTAAGCC ATCTTTTCTT CTTATCCACT ACTGCTACCA AAAAGTTACT
  ATTACTGTCA AGACTCTGCG TGTGTGTGTG TCGGTCCAGA AATTAACACA CTAGGGCTGA
  ATTGAATTCC AGAGAATTCT CCTTATCTTC AGATTCTTGG TACACGCCTA GACAAACTAC
  ACTCCAGCAA GGACAGAGAA                                            
  
  K = G/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	A/J	DBA/2J	LG/J	SM/J
ss38545799	mCV25387147	ABI	CRAMUS_MOUSE	f	SNP	T	T	T	G
ss146748572	ENSMUSSNP5411750	ENSEMBL	ENSEMBL_Sanger	r	SNP		A	A	C
ss323242456	CHEV_10_6623558	CHEVERUD	SCREENING_POP	r	SNP					A	A
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	A/J	DBA/2J	LG/J	SM/J
rs29328694					SNP	T	T	T	G	T	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr10:3672983 () rs orientation: forward

Symbol	Name	Function Class
A330032P22Rik	RIKEN cDNA A330032P22 gene	within coordinates
Gm30164	predicted gene, 30164	within coordinates
Gm56946	predicted gene, 56946	within coordinates
Rr219187	regulatory region 219187	1383 bp distal
Rr227319	regulatory region 227319	within coordinates