rs29330472 SNP Detail

Summary

• ID
  rs29330472
• Variation Type
  SNP
• Alleles
  G/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr10:41771917 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              ATAATTTATG CTGACGTACC
  TGCTTAATTG AAACTACTTC TTAGTCTGAG GGTCTTCTGA AAGCTGACAT AGAGGTAACA
  TTTCTAAAGT TTATTTTTTA AGAAATATTT TGTTTCTGAA ATATTTCTGA AATGTTTCTT
  GTTTTATATT GGATTTTTAA AATTTCTAAA TAAGATCTGT ATTTTTGTAG TCTGGAAAAC
  K
  TAAACTGAAT AACTAAACAA TCTATTTTGT TTGTTGTAAA CAGGTTCGTA ATAGTTGACA
  CTTTTAACAT AACCACTCTG CCTTTGTATT TTCTGTGAAA GGCGGCAGCG AGGCATCAGT
  GTTCCTACCT GGTGAATCTG CATGTCAGTG ACTTTCTTCA TGTTGGTGGG GACCCCAAGT
  GGCTCAATGG TTTAGAGAAT                                            
  
  K = G/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	DBA/2J
ss38550752	mCV24929819	ABI	CRAMUS_MOUSE	f	SNP	T	T	G	G	G
ss147075450	ENSMUSSNP12880	ENSEMBL	ENSEMBL_Sanger	f	SNP		T	G		G
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	DBA/2J
rs29330472					SNP	T	T	G	G	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr10:41771917 () rs orientation: forward

Symbol	Name	Function Class
Rr214767	regulatory region 214767	1717 bp distal
Rr219413	regulatory region 219413	284 bp proximal
Sesn1	sestrin 1	within coordinates
Tssr93071	transcription start site region 93071	1962 bp downstream
Tssr93072	transcription start site region 93072	1943 bp downstream