rs29331691 SNP Detail

Summary

• ID
  rs29331691
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr10:128656640 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        GTATT TGTCACCATG CCTAAAGACC
  Y
  GAGTTGGATC CCCAGGACCC ATGCA                                      
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
ss38550380	mCV24907968	ABI	CRAMUS_MOUSE	f	SNP	C	C	T	T
ss147740822	ENSMUSSNP6536076	ENSEMBL	ENSEMBL_Sanger	f	SNP	C	C		T
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
rs29331691					SNP	C	C	T	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr10:128656640 () rs orientation: forward

Symbol	Name	Function Class
Cpgi2421	CpG island 2421	683 bp proximal
Dnajc14	DnaJ heat shock protein family (Hsp40) member C14	1323 bp downstream
Ormdl2	ORM1-like 2 (S. cerevisiae)	within coordinates
Rr402366	regulatory region 402366	750 bp upstream
Sarnp	SAP domain containing ribonucleoprotein	993 bp upstream
Tssr96457	transcription start site region 96457	1097 bp downstream
Tssr96458	transcription start site region 96458	955 bp upstream
Tssr96459	transcription start site region 96459	974 bp upstream
Tssr96460	transcription start site region 96460	1013 bp upstream
Tssr96461	transcription start site region 96461	1116 bp upstream
Tssr99967	transcription start site region 99967	805 bp downstream