rs29332316 SNP Detail

Summary

• ID
  rs29332316
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr10:42405899 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GCACTTGCCT GATGACCTGA
  GCTCACACAA GGGAAGCAAA GATCTGACTC CTGTGAGTCA TCCACACGCG CACCTTTAGG
  AGTGTGCACA TACATGTGCT ACACACTTAA GCACACACAT GCACAAATAA GTCAGCAAAT
  GTAGCAACGT TTTCTTAATT TATTTGATGC TTAAGAGGAT CTTTGCTAGA TAAGCCATTC
  R
  TGACTTCTAT AGGTATCTGG CCTGCTAATT ATAAGGTCCA TTCTACTTAC TATTTTGAAC
  ATTGTTAGGA AGAATATATA TCTACAGGAA ACAAAAATGT CTACGTGGTG ACCAAAGCTT
  ATAATCCCAG GTGGAAGCAG GGTTGGGGGA GTGGTCATAA ACTCAAGGAT AGCCTGGGCT
  ACATGAAACC TTGAAAATAC                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J
ss38556850	mCV23303299	ABI	CRAMUS_MOUSE	f	SNP	G	A	A
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J
rs29332316					SNP	G	A	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr10:42405899 () rs orientation: forward

Symbol	Name	Function Class
Rr219442	regulatory region 219442	1899 bp distal
Rr219443	regulatory region 219443	702 bp proximal
Snx3	sorting nexin 3	within coordinates