rs29333370 SNP Detail

Summary

• ID
  rs29333370
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr10:40480359 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TTCTTTGCCC AGAGATTTGG
  TTACAGTACA GACCGTGGGA TTGTCTTGAT TACTAAATCA TCTCCTGTAT CAATGTTGTA
  TAAAGACTGC TCCCCAATTT TCTCTGATTT GTTAATAAAA AACTAATCGG TCCATAACTG
  CGCAGAGAAG GCAGGGCCAG GACCAGGGTC CCAGGAAGAG AGAAGTAGGA GAAGGACCAC
  R
  GGGAAAGAGA AGAGGTAGAG AGACCATGTG GAGAGCTGGG GTTGAGGCAG AGGGTCCAGG
  AGGAGTCATG ATGAGCATGT CACCAAGGGA TTTGCCATGA GGACACACAT GGAACAGAAT
  AAGCCAAGGT GAGACTCAGA TTGAAGGTAA AGGGCTGTGT GAGTGGGAAA CAGGTAGCTG
  AGAGGGTTAG AGTAGATGAA                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
ss38551486	mCV23537203	ABI	CRAMUS_MOUSE	f	SNP	A	G	G	G
ss147067210	ENSMUSSNP6082760	ENSEMBL	ENSEMBL_Sanger	f	SNP	A	G		G
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
rs29333370					SNP	A	G	G	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr10:40480359 () rs orientation: forward

Symbol	Name	Function Class
Rr214672	regulatory region 214672	642 bp proximal
Rr222650	regulatory region 222650	523 bp proximal
Slc22a16	solute carrier family 22 (organic cation transporter), member 16	231 bp downstream