rs29333560 SNP Detail

Summary

• ID
  rs29333560
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr10:123034417 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        GCTCT GGGTTCCTGT TGAGCTCTGG
  Y
  TGTGACCTTC CCCTAGCGTA AGCCA                                      
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J
ss38552704	mCV23574781	ABI	CRAMUS_MOUSE	f	SNP	C	T	C
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J
rs29333560					SNP	C	T	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr10:123034417 () rs orientation: forward

Symbol	Name	Function Class
Cpgi2311	CpG island 2311	905 bp distal
Gm4129	predicted gene 4129	within coordinates
Gm55025	predicted gene, 55025	1541 bp upstream
Rr224370	regulatory region 224370	616 bp distal
Tssr99666	transcription start site region 99666	1551 bp upstream
Tssr99667	transcription start site region 99667	1537 bp upstream
Tssr99668	transcription start site region 99668	1525 bp upstream
Usp15	ubiquitin specific peptidase 15	1517 bp upstream