rs29334457 SNP Detail

Summary

• ID
  rs29334457
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr10:86288012 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                                                   
  ATGGGGCAGG ATCGCCACCC ATATCCTGTA GATGGAGAAG TTGCCATTTA AGGTCTCATA
  AGTTTCCCAT AGTTTCAGAT TTTCAAGATT CAGTACAATT CCTTCCTAAT GGGGACTCTG
  CCAGCAGATG GCCCACTTAA TCCACATTTA CATTACATTA ACATCCACAT TATTTACAGC
  TGCTTCCATA GACACCACAC ACCCCACACA CACACACACA CACACACACA CACACACACA
  CACACACCAC ACATGCACAT GCACGCGAGC ATGCACGCGC GCGCACGCAC GCACGCGCGC
  R
  CACACACACA CACACACACA CTCCTTCTTG GGATGCTTCA GTACGTCCTC TGCTTTATGA
  TTCTGGTCTT TTGCACAGGC TCACACCTCT ATTTTGCCAG ACTCCTCTTT CTCGAAGTCC
  ATAGTACTTA TAGGTGCTAT CTGCTCTCTT GTTTTCCTTA GCAGCAACCC CACCTGGCTG
  GGCTGGGTGC CCCTCCTCCA CAGGTGAGCA CATCATACCC TCTACCTTAT GGTACTGCCC
  TGCCTTGTAA TTATACGTTA TGATCTGTCC TCTGCCTCTA AACATCCAGT CTGTGAGCTG
                                                                   
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	A/J	DBA/2J
ss38552914	mCV23610124	ABI	CRAMUS_MOUSE	f	SNP	A	G	G	A
ss147219941	ENSMUSSNP6846676	ENSEMBL	ENSEMBL_Sanger	f	SNP		G	G	A
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	A/J	DBA/2J
rs29334457					SNP	A	G	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr10:86288012 () rs orientation: forward

Symbol	Name	Function Class
Rr217202	regulatory region 217202	within coordinates
Rr229241	regulatory region 229241	within coordinates
Syn3	synapsin III	within coordinates