rs29334769 SNP Detail

Summary

• ID
  rs29334769
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr10:117839599 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        CATACAAAAC ACAGACATTT CAAAAGTCGC CCATGTCTAA
  CCCTGCACCT TCCTGGGTCC TGGTAAGTAG CTGGGGTATT TCCATATCTT TCCTGCTACA
  Y
  GGTCCCCAAA CCATCATAAA ACCCCTTTAG AGTCTTCCTG AAAAGAGGCA AGCACATTTG
  GAAGAGCTTC TGTGGGTGAC CTTAGCTGTT CTCTGCCGA                       
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
ss38557785	mCV24218861	ABI	CRAMUS_MOUSE	f	SNP	T	C	T	C
ss147591167	ENSMUSSNP2510057	ENSEMBL	ENSEMBL_Sanger	f	SNP		C		C
ss323501174	CHEV_10_117440750	CHEVERUD	SCREENING_POP	f	SNP					C	T
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
rs29334769					SNP	T	C	T	C	C	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr10:117839599 () rs orientation: forward

Symbol	Name	Function Class
Gm37852	predicted gene, 37852	1244 bp upstream
Igs80	intergenic site 80	1239 bp distal
Rr226004	regulatory region 226004	within coordinates
Rr385361	regulatory region 385361	1717 bp upstream